Visual example of the minimizer and open syncmer selection methods

Jim Shaw on X: Me and @YunWilliamYu's work on local k-mer

Theory of local k-mer selection with applications to long-read

Speed and percentage speed up of each Bowtie2 variant on GCAT

The minimizer Jaccard estimator is biased and inconsistent

Visual example of the minimizer and open syncmer selection methods

Using syncmers improves long-read mapping

Navigating bottlenecks and trade-offs in genomic data analysis

Parameterized syncmer schemes improve long-read mapping

Jim Shaw's research works University of Toronto, Toronto (U of T

a) Example of selecting minimizers with k = 3, w = 5, and the

Strobealign: flexible seed size enables ultra-fast and accurate

Sequence-specific minimizers via polar sets

Jim Shaw's research works University of Toronto, Toronto (U of T